SARS-Cov-2 The Beta Genome Coronavirus: A Brief Overview,

Pathogenesis and Treatment

 

Mr. Akshay Gade*, Miss. Rutuja Sawant, Miss. Shreya Parkar, Miss. Prajakta Kegade

Department of Pharmaceutics, M Pharmacy, University of Mumbai, Vidya Nagari, Kalina,

Santacruz East, Mumbai, Maharashtra 400098.

*Corresponding Author E-mail: gadeakshay97@gmail.com

 

ABSTRACT:

Corona Virus Disease (COVID 19) causes respiratory illness outbreak in Wuhan, Hubei Province, China in December. The COVID 19 is caused by the SARS-CoV-2, it is highly infectious respiratory disease including pneumonia, cold, sneezing, and coughing while in the animal it causes diarrhea and upper respiratory diseases. Over the next few weeks, the virus spread from Wuhan to affect different provinces in China, and after a few months, it is now presenting in 109 countries and many more are included in the list with a higher number of patients. These patients having similar symptoms, but the level of infection is different from the patients. The symptoms of COVID 19 in patients mainly include initial cold, mild fever, sore throat with a dry cough, breathlessness, fatigue, malaise among others. Usually the elderly and those with comorbidity, the disease may progress to pneumonia, acute respiratory distress syndrome (ARDS), and multi-organ dysfunction. Most of the recently infected people are asymptomatic so it’s a very crucial challenge for the government to diagnose the patients with no symptoms but infected by this disease. The World Health Organization has declared it an International emergency which is the evidence statement that noticed every country to follow the new rules of emergency in their respective countries. Various prevention and treatment measures are followed by various countries to find a way to come out from this pandemic but still, no fully assessed treatment was found. Based on current published evidence, this review systematically summarizes the epidemiology, it's control and prevention. We conducted a literature review of publicly available information about the pathogen and the current epidemic, causative agent, pathogenesis, and immune responses, epidemiology, diagnosis, treatment, and management of the disease, strategies are all reviewed.

 

KEYWORDS: coronavirus, ectodomain, Nosocomial, miniopterus, immunopathology.

 

 


INTRODUCTION:

The 2019 novel corona virus (2019-nCoV) or the severe acute respiratory syndrome corona virus 2 (SARS-CoV-2) as it is rapidly spreading to the rest of the world from its origin in Wuhan City of Hubei Province of China1.

 

The disease it causes has been named coronavirus disease 2019 (COVID-19). The SARS-CoV is a positive-stranded RNA virus that originates from the Coronaviridae family. Other viruses from the same family include the severe acute respiratory syndrome coronavirus (SARS-CoV), which appeared in 2002, and Middle East respiratory syndrome coronavirus (MERS-CoV), which was reported in 20122. COVID-19 was of clustering onset and mainly affected the respiratory system with some patients rapidly progressing to acute respiratory distress syndrome (ARDS); other organ functions were less involved3,4. Infection is transmitted through large droplets generated during coughing and sneezing by symptomatic patients but can also occur from asymptomatic people and before onset of symptoms5. Some patients had a low oxygenation index, indicating severe respiratory failure. Chest imaging findings suggested the involvement of both lungs. Chest computed tomography (CT) scans usually showed multifocal bilateral patchy shadows and/or ground-glass opacities; some patients showed a mixed pattern of ground-glass opacities and consolidation6. In a subset of patients, by the end of the first week, the disease can progress to pneumonia, respiratory failure, and death. This progression is associated with an extreme rise in inflammatory cytokines including IL2, IL7, IL10, GCSF, IP10, MCP1, MIP1A, and TNFα7. Corona viruses mainly recognize their corresponding receptors on target cells through S proteins on their surface; entry to the cells results in infection. A structure model analysis shows that SARS-CoV-2 binds to ACE2 with more than a 10-fold higher affinity than SARS-CoV, at a level above the threshold required for virus infection8. Specific diagnosis is by specific molecular tests on respiratory samples (throat swab/nasopharyngeal swab/sputum/endotracheal aspirates and bronchoalveolar lavage). The virus may also be detected in the stool and in severe cases, the blood9.

 

HISTORY AND ORIGIN OF SPREAD:

Coronaviruses were first discovered in the 1930s when an acute respiratory infection of domesticated chickens was shown to be caused by the infectious bronchitis virus (IBV)10. Arthur Schalk and M.C. In 1931 a new respiratory infection of chickens in North Dakota described by Hawn. Gasping and listlessness were used for characterizing infection of new-born chicks. The chicks' mortality rate was 40–90%11. Fred Beaudette and Charles Hudson six years later successfully isolated and cultivated the infectious bronchitis virus which caused the disease12. In the 1940s, two more animal coronaviruses, mouse hepatitis virus (MHV) and transmissible gastroenteritis virus (TGEV), were isolated13. It was not realized at the time that these three different viruses were related14.

 

Scientists found evidence of human coronaviruses evidence was found by a scientist in the late 1960s, particularly prevalent include 229E, NL63, OC43, and HKU1 Human coronavirus found in the noses of people with the common cold. The presence of the crown - like projections on their surfaces name “coronavirus”. in Latin “halo” or “crown” means “Corona”. During the winter months and early spring coronavirus infections in humans most often occur15. sense RNA viruseranging from 60nm to 140nm in diameter with spike-like projections on its surface are enveloped positive giving it a crown-like appearancehence the name coronavirus when observed under the electron microscope16.

In 2002– 2003 when a new coronavirus of the β genera and with origin in bats crossed over to humans via the intermediary host of palm civet cats in the Guangdong province of China17. Almost a decade later in 2012, the Middle East respiratory syndrome coronavirus (MERS-CoV), also of bat origin, emerged in Saudi Arabia with dromedary camels as the intermediate host18. In later December 2019, a cluster of patients was admitted to hospitals with an initial diagnosis of pneumonia of an unknown etiology. These patients were epidemiologically linked to the seafood and wet animal wholesale market in Wuhan, Hubei Province, China19,20. By January 2, 2020, 41 admitted hospital patients had been identified as having laboratory-confirmed COVID-19 infection, less than half of these patients had underlying diseases, including diabetes, hypertension, and cardiovascular disease21. These patients were presumed to be infected in that hospital, likely due to nosocomial infection.

 

STRUCTURE OF COVID-19:

Coronaviruses is large, roughly spherical, enveloped, positive-stranded RNA viruses with surface projections22 reference to the Fig. 1: Structure of COVID

 

. The average diameter of the virus particles is around 125 nm.They have the largest genome among all RNA viruses, ranging from 27 to 32 kb23. The viral envelope consists of a lipid bilayer, in which the three structural proteins are present, The membrane protein (M) and the envelope protein (E) are involved in virus assembly, whereas the spike protein (S) mediates virus entry into host cells24. The ratio of E:S:M is approximately 1:20:30025. The spike forms large projected from the virus surface, giving coronaviruses the appearance of crownshence their name; corona. (In Latin means crown)26. The coronavirus spike contains three segments which are as follows- a large ectodomain, a single-pass trans- membrane anchor and a short intracellular tail. The ectodomain consists of a receptor-binding subunit S1 and subunit S2. Electron microscopy studies revealed that the spike is a clove-shaped homotrimer with three S1 heads and atrimeric S2 stalk27. During virus entry, S1 binds to a receptor on the host cell surface for viral attachment, and S2 fuses the host, allowing viral genomes to enter host cells. The E and M protein are important in forming the viral envelope and maintaining its structural shape .Receptor binding and membrane fusion are the initial and crucial steps in the coronavirus infection cycle; they also serve as primary targets for human inventions28,29.

 

Fig. 1: Structure of COVID

 

GENETICS AND VIROLOGY:

Coronaviruses belong to the family Coronaviridae. They can be classified into four genera i.e. Alphacoronavirus, Beta coronavirus, Gamma coronavirus, and Delta coronavirus30. Different genera’s can be further divided into subtypes which have been listed in

Table 1. The various genus of coronaviruses such as the Alphacoronavirus having the species Human coronavirus NL63, Human corona virus 229E, miniopterus bat coronavirus-131 and Beta coronavirus consisting of species Bovine coronavirus, Human coronavirus OC43, Middle East Respiratory Syndrome-related corona virus (MERS), Severe acute respiratory syndrome related coronavirus(SARS-CoV, SARS-CoV-2)32. The Gamma coronavirus having the species of Avian corona virus, Beluga whale coronavirusSW133, and the Delta coronavirus consist of Bulbul coronavirus HKU11, Porcine coronavirus HKU1534.

 

Table 1: Different strains of coronaviruses

Genus

Species

Alphacoronavirus

Human coronavirus NL63, Human corona virus 229E, miniopterus bat coronavirus 1.

Beta coronavirus

Bovine coronavirus, Human coronavirus OC43, Middle East Respiratory Syndrome related corona virus (MERS), Severe acute respiratory syndrome related coronavirus (SARS-CoV, SARS-CoV-2).

Gamma coronavirus

Avian corona virus, Beluga whale coronavirus SW1.

Delta coronavirus

Bulbul coronavirus HKU11, Porcine coronavirus HKU15.

 

The genome of COVID is a single-stranded positive-sense RNA with 5′-cap structure and 3′poly-A tail35 the 5’ terminalencodes the replicateswhich is the nonstructural proteins responsible for viral replication within the cell36,37. CoV genomes encode total 16 nonstructural proteins and they exhibit multiple functions required for viral replication38 CoVs have the general genome organization: 5’UTR-polymerase gene and UTR 3’ - structural protein genes, where the UTR are untranslated regions. The structural protein genes of coronaviruses are in the order (HE)-S-E-M-N39. Critical proteins for viral replication include the main protease (nsp5), the papain-like protease (nsp3), and the RNA-dependent RNA polymerase (nsp12, RdRp)40. The other constituent proteins facilitate viral replication and disturb the intrinsic host immune functions41. The structure of the receptor-binding gene region is very similar to that of the SARS coronavirus and the virus use the angiotensin-converting enzyme 2 (ACE2) receptor for cell entry42.

 

PATHOPHYSIOLOGY:

Human-to-human transmission primarily occurs due to close contact and through respiratory droplets; large droplets of virus-laden mucus are the primary mode of transmission. Virus life cycle consists of a series of steps that begin with the viral binding with target cell and continue up to the viral replication43. Once viral particles enter the respiratory tract, the virus attaches to pulmonary cells. SARS-CoV-2 (COVID-19) binds to ACE2 (the angiotensin-converting enzyme 2) receptor by its Spike protein and allows COVID-19 to enter44. After the binding virus is internalized via endocytosis without access to the host intracellular compartment until a membrane fusion event occurs45,42. This process is mediated by membrane-bound protease known as transmembrane serine protease 2 (TMPRSS2), which cleaves the S protein which is a necessary step for membrane fusion46. Upon membrane fusion, viral RNA enters cytoplasmic membranes where the replication and transcription take place. RNA synthesis is mediated by the viral replicate, a huge protein complex47. Once the virus enters the host cell, the viral RNA is exposed. Open reading frames 1a and 1ab (ORF1a and ORF1ab) are translated, producing polyproteins (pp1a and pp1ab)37. These polyproteins are later cleaved to form structural proteins for the RNA replicase- transcriptase complex, which is responsible for the replication and transcription of viral RNA48. Viral nucleocapsids are assembled and bud from the lumen of the endoplasmic reticulum Golgi intermediate compartment (ERGIC). As viral nucleocapsids enclosed viral RNA to produce new coronavirus virions, they are exocytosed which leads to the completion of the replication cycle49. These viral lifecycle steps in Fig. 2 provide potential targets for drug therapy.

 

Immune Response:

In milder cases of SARS, a robust type I interferon response leads to appropriate adaptive immune responses which results in a viral clearance50. In severe cases (SARS and MERS) decreased viral control is associated with a delayed or absent type I interferon response; instead, the initial response recruits neutrophils, monocytes, and macrophages to the lung, which is associated with increased immunopathology Fig. 2. The influx of myeloid cells into the lungsleads to cytokine storm, with increases in levels of serum pro-inflammatory cytokines ( IL-1, IL-6, IL-12, and TNFɑ ) that increase vascular permeability and decrease lung function51.


 

Fig. 2: Virus replication cycle and immune response

 


SYMPTOMS:

Based on the current epidemiological surveys, the incubation period of COVID is 1–14 days. The time after exposure and before having symptoms is called an incubation period. Cough cold, fever iscommon symptoms. Most of the people observed with mild symptoms

52. The virus can also lead to severe complications such as pneumonia, septic shock, cytokine Strome. Many of cases found with no symptoms53.

 

Fig. 3: Symptoms of COVID-19

 

RECEPTOR RECOGNITION PATTERN OF CORONA VIRUSES:

Coronaviruses are a large family of single-stranded enveloped RNA viruses and can be divided into four major genera54. Viral envelope glycoprotein initiate entry of viruses into cells by binding to cell surface receptors followed by conformational changes leading to membrane fusion and delivery of the genome to the cytoplasm55. Prototypic α-genus coronaviruses mainly includeporcine transmissible gastroenteritis coronavirus (TGEV), human coronavirus NL63 (HCoV-NL63), and porcine respiratory coronavirus (PRCV). Prototypic β-genus coronaviruses include mainly Middle East respiratory syndrome coronavirus (MERS-CoV), severe acute respiratory syndrome coronavirus (SARS-CoV), and bovine coronavirus (BCoV)mouse hepatitis coronavirus (MHV). Prototypic γ-genus coronaviruses include avian infectious bronchitis virus (IBV)56–58 reference to the Fig. 4. Numerous lines of research studies have been carried out that which host is susceptible to SARS-CoV infection which is primarily determined by the affinity between the viral RBD and host ACE2 in the initial viral attachment step59–61. S1 domains and their complexes with their respective receptor have elucidated many puzzles which analyses of crystal structures of coronavirus mainly associated with coronavirus-receptor interactions. Since the crystal structures of five coronavirus S1 domains complexed with their respective receptor have been determined. These are the β-genus SARS-CoV S1-CTD complexed with human ACE262.

 

Fig. 4: Receptor binding of different genomes of Coronavirus

 

CASE STUDY:

Brazil's total number of cases has grown five fold in less than a month, from 85,000 on May 1 to 438,000 on May 29Error! Reference source not found.. There have also been significant rises in other Latin American countries like Peru, Chile, and Mexico. The United States has now experienced more than 100,000 fatalities, according to statistics from Johns Hopkins University. While its pace of increase has dropped overall, some areas that have reopened their economies have seen a rising number of infections, and the battle with the coronavirus is far from over in the country. Worldwide, there are now 5.7 million cases and more than 350,000 fatalities as shown in

Table 263

 

Table 2: Worldwide data of corona Active patients and Fatalities are listed

Countries

Active

Fatalities

United States

1,699,073

100,396

Brazil

 411,821

 25,598

Russia

 370,171

 3,962

Britain

 267,240

 37,460

Spain

 236,769

 27,118

Italy

 231,139

 33,072

Germany

 181,524

 8,428

Turkey

 159,797

 4,431

India

 151,767

 4,337

France

 145,746

 28,595

Iran

 141,591

 7,564

Peru

 135,905

 3,983

Canada

 87,508

 6,765

China

 82,993

 4,634

Chile

 82,298

 841

Saudi Arabia

 78,541

 425

Mexico

 74,560

 8,134

Pakistan

 59,151

 1,225

Japan

 16,683

 867

SouthKorea

 11,344

 269

 

DIAGNOSIS:

The U.S. CDC has developed criteria for persons under investigation (PUI)64. If a person is deemed a PUI, immediate prevention and infection control measures are undertaken. Epidemiological factors are used to assess the requirement of testing. These include close contact with a laboratory-confirmed patient within 14 days of symptoms or travel history64. For patients who meet diagnostic criteria for SARS-CoV-2 testing, the CDC recommends a collection of specimens from the upper respiratory tract (nasopharyngeal and oropharyngeal swab) and,if possible, the lower respiratory tract (sputum, tracheal pirate,or bronchoalveolar lavage)65. Performing real-time fluorescence (RT-PCR) to detect the positive nucleic acid of SARS-CoV-2 in sputum, throat swabs, and secretions of the lower respiratory tract samples are the following procedures have been suggested for diagnosis of suspected patients66–68. If a positive test result is achieved, it is recommended to repeat the test for verification purposes. A negative test with a strong clinical suspicion also warrants repeat testing64.

 

Laboratory Findings:

Among COVID-19 patients, common laboratory abnormalities include lymphopenia69–71 prolonged prothrombin time, and elevated lactate dehydrogenase71. Patients in the intensive care unit have shown higher levels of interleukin (IL) 2, IL-7, IL-10, GCSF (granulocyte colony-stimulating factor), IP10 (interferon gamma-induced protein 10), MCP1 (monocyte chemotactic protein 1), MIP1A (macrophage inflammatory protein alpha), and TNF-α (tumor necrosis factor-α)72.

 

Radiology Finding:

In a study describing 41 of the initial cases of 2019-nCoV infection, all 41 patients had pneumonia with abnormal findings on the chest computed tomography (CT-scan)72. Abnormalities on chest CT-scan were also seen in another study of 6 cases in which all of them showed multifocal patchy ground-glass opacities notably nearby the peripheral sections of the lungs73. As the disease course continues, mild to the moderate progression of disease was noted in some cases which manifested by extension and increasing density of lung opacities74. Bilateral multiple lobular and sub segmental areas of consolidation are typical findings on the chest CT-scan of ICU-admitted patients72.

 

TREATMENT:

The person-to-person transmission of COVID-19 infection led to the isolation of patients. At present, there are no specific antiviral drugs or vaccines against COVID- 19 infections for potential therapy of humans. The only option available is using broad-spectrum antiviral drugs like Nucleoside analogs and also HIV-protease inhibitors that could attenuate virus infection until the specific antiviral becomes available75. Chloroquine and hydroxychloroquine appear to block viral entry into cells by inhibiting glycosylation of host receptors, proteolytic processing, and endosomal acidification76,77. Favipiravir, previously known as T-705, is a prodrug of a purine nucleotide, favipiravir ribofuranosyl-5′-triphosphate. The active agent inhibits the RNA polymerase, halting viral replication78. The first clinical use of remdesivir was for the treatment of Ebola79; however, successful case reports describing the use of remdesivir for COVID-19 have been reported in the

Table 3:A summaries of the drugs selected for treatment

Agent

Target

Contraindications

Toxicities

Drug-drug interaction

Chloroquine phosphate

Blockade of viral entry by inhibiting glycosylation of host receptor, proteolytic processing.

Hypersensitivity to chloroquine,4-aminoquinoline compounds

Abdominal cramps, anorexia, nausea, vomiting retinal toxicity, central nervous system effects

 

CYP2D6

and

CYP3A4

Hydroxy

chloroquine sulfate

Same mechanism as of chloroquine

Hypersensitivity to hydroxychloroquine,4-aminoquinoline, and other formulation compounds

Same as chloroquine but less common

CYP2D6

and

CYP3A4, CYP3AS

Remdesivir

RNA polymerase inhibitor

Exclusion criteria based on a protocol

Elevated transaminases, kidney injury

Not a significant inducer/inhibiter of CYP enzymes

Tocilizumab

IL-6 inhibition reduction in a cytokine storm

Known hypersensitivity with tocilizumab and caution with neutropenia patients

Increase in upper respiratory tract infections and hypertension

IL-6 reduces mRNA expressions for CYP450 and CYP3A4 isoenzymes

Favipiravir

RNA polymerase inhibitor

Exclusion criteria based on a protocol

Elevated transaminases and reduction in neutrophil count

CYP2C8 and aldehyde oxidase inhibitor

 


80,81.

 

Isolation and supportive care including oxygen therapy, fluid management, and antibiotics treatment for secondary bacterial infections are recommended82. Some COVID-19 patients progressed rapidly to ARDS and septic shock, which was eventually followed by multiple organ failure69,72. Patients with mild infections require early supportive management. This can be achieved with the use of acetaminophen, external cooling, oxygen therapy, nutritional supplements, and anti-bacterial therapy83. Critically ill patients require high flow oxygen, extracorporeal membrane oxygenation (ECMO), glucocorticoid therapy, and convalescent plasma83. The administration of systemic corticosteroids is not recommended to treat ARDS64. Furthermore, there are several other compounds are in development. EIDD-2801 compound that hasshown high therapeutic potential against seasonal and pandemic influenza virus infections and this represents another potential drug to beconsidered for the treatment of COVID-19 infection84.

 

Therapies:

·       Monoclonal Antibodies:

Monoclonal antibodies directed against key inflammatory cytokinesor other aspects of the innateimmune response represent another potential class of adjunctive therapies for COVID19. The rationale for their use is that the underlying pathophysiology of significant or damage in the lungs and other organs is caused by an amplified immune response and cytokine release, or “cytokinestorm”85. Thus, monoclonal antibodies against IL-6 could theoretically dampen this process and improve clinical outcomes86. Inhibition fusion of CoV with human cells and to decrease the mortality rate in SARS-CoV-infected patients was shown by monoclonal antibodies (from convalescent human plasma, animal plasma, or manufactured) against the spike glycoprotein S87–93. A protein, which also inhibits the spike glycoprotein S, although it is not a monoclonal antibody, has been isolated from a red alga called Griffithsia However to date, it has only been tested in animal studies94. Tocilizumab, a monoclonal antibody IL-6 receptor antagonist, is FDA approved to treat RA and cytokine release syndrome following chimeric antigen receptor T-cell therapy shown in

Table 3:A summaries of the drugs selected for treatment

Agent

Target

Contraindications

Toxicities

Drug-drug interaction

Chloroquine phosphate

Blockade of viral entry by inhibiting glycosylation of host receptor, proteolytic processing.

Hypersensitivity to chloroquine,4-aminoquinoline compounds

Abdominal cramps, anorexia, nausea, vomiting retinal toxicity, central nervous system effects

 

CYP2D6

and

CYP3A4

Hydroxy

chloroquine sulfate

Same mechanism as of chloroquine

Hypersensitivity to hydroxychloroquine,4-aminoquinoline, and other formulation compounds

Same as chloroquine but less common

CYP2D6

and

CYP3A4, CYP3AS

Remdesivir

RNA polymerase inhibitor

Exclusion criteria based on a protocol

Elevated transaminases, kidney injury

Not a significant inducer/inhibiter of CYP enzymes

Tocilizumab

IL-6 inhibition reduction in a cytokine storm

Known hypersensitivity with tocilizumab and caution with neutropenia patients

Increase in upper respiratory tract infections and hypertension

IL-6 reduces mRNA expressions for CYP450 and CYP3A4 isoenzymes

Favipiravir

RNA polymerase inhibitor

Exclusion criteria based on a protocol

Elevated transaminases and reduction in neutrophil count

CYP2C8 and aldehyde oxidase inhibitor

 


86.

·       Cellular Therapy:

COVID-19 is known to be associated with overt inflammatory responses69,72. The useof mesenchymal stromal cells obtained from allogeneic donors in cellular therapy facilitates the regeneration of damaged cells and thus is effective in reducing non-productive inflammation inpatients95. Studies have shown that autologous hematopoietic stem-cell transplant could result inshort-term expansion and isolation of antivirus-directed T cells for cytomegalovirus infection treatment.Hence, the expansion of anti-SARS-CoV-2-specific T cells is believed to be potential adjunct treatment for patients diagnosed with COVID-1996.

 

·       Herbs For COVID-19

In the case ofCoronavirus, the viral entry is mediated by the Receptor-Binding Domain (RBD) of its spike (S)glycoprotein, which binds to the host cell receptor Angiotensin-Converting Enzyme-2 (ACE2)97,98. RBD has been an attractive target for the researchers to abrogatecoronavirus infection and suggested that certain human antibodies recognized RBD on the S1domain and inhibited the viral infection by blocking the attachment of ACE299,100. Withania somnifera (L.) Dunal (Solanaceae), commonly known as Ashwagandha, one of the mostvalued medicinal plants of the traditional Indian systems of medicines, is used in more than 100formulations ofAyurveda, and is thought to be therapeutically equivalent to Ginseng101

 

Table 3:A summaries of the drugs selected for treatment

Agent

Target

Contraindications

Toxicities

Drug-drug interaction

Chloroquine phosphate

Blockade of viral entry by inhibiting glycosylation of host receptor, proteolytic processing.

Hypersensitivity to chloroquine,4-aminoquinoline compounds

Abdominal cramps, anorexia, nausea, vomiting retinal toxicity, central nervous system effects

 

CYP2D6

and

CYP3A4

Hydroxy

chloroquine sulfate

Same mechanism as of chloroquine

Hypersensitivity to hydroxychloroquine,4-aminoquinoline, and other formulation compounds

Same as chloroquine but less common

CYP2D6

and

CYP3A4, CYP3AS

Remdesivir

RNA polymerase inhibitor

Exclusion criteria based on a protocol

Elevated transaminases, kidney injury

Not a significant inducer/inhibiter of CYP enzymes

Tocilizumab

IL-6 inhibition reduction in a cytokine storm

Known hypersensitivity with tocilizumab and caution with neutropenia patients

Increase in upper respiratory tract infections and hypertension

IL-6 reduces mRNA expressions for CYP450 and CYP3A4 isoenzymes

Favipiravir

RNA polymerase inhibitor

Exclusion criteria based on a protocol

Elevated transaminases and reduction in neutrophil count

CYP2C8 and aldehyde oxidase inhibitor

 


Withanolides present in roots and leaves of W. Somnifera were docked against ACE2-RBD complex. The phytocompound which bound to the interface was subjected to targeted/focused docking. At the ACE2-RBD complex, the phytocompounds were bound tightly. At the interface of the receptor and RBD, only the Withanone bound. Therefore, Withanone was analyzed further to study its role in blocking or weakening the interactions between the ACE2 receptor and RBD102.

 

SAFETY MEASURES:

·       Wash your hands regularly and perform hand hygiene with soap and water for at least 20 seconds. 60% alcohol based Sanitizers should be used.

·       Maintain social distancing and avoid crowded places.

·       Touching your face, nose, eyes and, the mouth should be avoided.

·       Implement respiratory hygiene.

·       Seek medical care if you have fever, cough and breathing problems.

·       Healthcare provider has given the advice to be followed.

·       Use sanitizer whenever needed.

·       Regularly checking their temperature, andinformimmediately to their doctor if they having symptoms such as shortness of breath, cough, or fever103.

·       Moreover, women who have a travel history or COVID-19 symptoms should be kept in isolation for at least 14 days.

·       Face masks should be provided to patients who are coughing.

·       The National Health Commission of China proposed that neonates from mothers who are confirmed or suspected cases should be kept under observation and not breastfed.

·       Patients with respiratory symptoms should be asked to usesurgical masks

·       Personal protection equipment (PPE) is mandatory while treating such patients104.

 

FUTURE PERSPECTIVE:

Extensive measures to reduce person-to-person transmission of COVID-19 are required to control the current outbreak. Special attention and efforts to protect or reduce transmission should be applied to susceptible populations including children, health care providers, and elderly people. A guideline was published for the medical staff, healthcare providers, and, public health individuals and researchers, and who are interested in the 2019-nCoV105.

 

The public services and facilities should provide decontaminating reagents for cleaning hands on a routine basis. Physical contact with wet and contaminated objects should be considered in dealing with the virus, especially agents such as fecal and urine samples that can potentially serve as an alternative route of transmission106,107.

 

An unprecedented disaster, especially in the most afflicted countries including China, Italy, Iran, and the USA the COVID-19 outbreak is proving to be in all aspects, especially health, social, and economic. It is too early to forecast any realistic scenario, but it will have a strong impact on World Wide108. In addition to this hopeful low impact, if the prevention measures will be implemented, we could register a lower incidence of hygiene-linked diseases that still represent the leading causes of death109. A vaccine is under development.

 

CONCLUSION:

The 2019 novel coronavirus (2019-nCoV) or the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) as it is rapidly spreading to the rest of the world from its origin in Wuhan City of Hubei Province of China. Now it is spread to each, and every corner of the world has numerous patients who are treated technically with a variety of treatment measures followed by the different countries. The resembling structure and different strains are reviewed in the following data with structure and receptor binding mechanisms are shown. The public services and facilities should provide decontaminating reagents for cleaning hands on a routine basis. Physical contact with wet and contaminated objects should be considered indealing with the virus, especially agents such as fecal and urine samples that can potentially serve as an alternative route of transmission. Wearing masks and washing hands with soaps and sanitizers. Therapies such as monoclonal antibodies, antiviral and herbal drugs are used for a recent treatment basis. In addition to this hopeful low impact, if the prevention measures will be implemented, we could register a lower incidence of hygiene-linked diseases that still represent the leading causes of death.

 

DECLARATION OF INTEREST:

The authors report no conflicts of interest. The authors alone are responsible for the content and writing of this article.

 

ACKNOWLEDGEMENTS:

The authors acknowledge this research did not receive any specific grant from funding agencies in the public, commercial, or not-for-profit sectors.

 

REFERENCE:

1.      Wang, C.; Horby, P. W.; Hayden, F. G.; Gao, G. F. A Novel Coronavirus Outbreak of Global Health Concern. The Lancet2020, 395 (10223), 470–473. https://doi.org/10.1016/S0140-6736(20)30185-9.

2.      Coronavirus | Human Coronavirus Types | CDC https://www.cdc.gov/coronavirus/types.html (accessed May 30, 2020).

3.      A familial cluster of pneumonia associated with the 2019 novel coronavirus indicating person-to-person transmission: a study of a family cluster - The Lancet https://www.thelancet.com/journals/ lancet/article/PIIS0140-6736(20)30154-9/fulltext (accessed May 30, 2020).

4.      Lt, P.; Tv, N.; Qc, L.; Tv, N.; Ht, N.; Hq, L.; Tt, N.; Tm, C.; Qd, P. Importation and Human-to-Human Transmission of a Novel Coronavirus in Vietnam https://pubmed.ncbi.nlm.nih.gov/ 31991079/ (accessed May 30, 2020). https://doi.org/10.1056/ NEJMc2001272.

5.      C, R.; M, S.; P, S.; G, B.; G, F.; C, W.; T, Z.; V, T.; C, J.; W, G.; M, S.; C, D.; P, V.; K, Z.; S, Z.; R, W.; M, H. Transmission of 2019-nCoV Infection From an Asymptomatic Contact in Germany https://pubmed.ncbi.nlm.nih.gov/32003551/ (accessed May 30, 2020). https://doi.org/10.1056/NEJMc2001468.

6.      M, C.; A, B.; X, M.; N, Z.; M, H.; X, Z.; J, C.; W, X.; Y, Y.; Za, F.; A, J.; K, L.; S, L.; H, S. CT Imaging Features of 2019 Novel Coronavirus (2019-nCoV) https://pubmed.ncbi.nlm.nih.gov/ 32017661/ (accessed May 30, 2020). https://doi.org/10.1148/ radiol.2020200230.

7.      Chen, N.; Zhou, M.; Dong, X.; Qu, J.; Gong, F.; Han, Y.; Qiu, Y.; Wang, J.; Liu, Y.; Wei, Y.; Xia, J.; Yu, T.; Zhang, X.; Zhang, L. Epidemiological and Clinical Characteristics of 99 Cases of 2019 Novel Coronavirus Pneumonia in Wuhan, China: A Descriptive Study. The Lancet2020, 395 (10223), 507–513. https:// doi.org/10.1016/S0140-6736(20)30211-7.

8.      Cryo-EM structure of the 2019-nCoV spike in the prefusion conformation https://www.ncbi.nlm.nih.gov/pmc/articles/ PMC7164637/ (accessed May 30, 2020).

9.      Huang, P.; Liu, T.; Huang, L.; Liu, H.; Lei, M.; Xu, W.; Hu, X.; Chen, J.; Liu, B. Use of Chest CT in Combination with Negative RT-PCR Assay for the 2019 Novel Coronavirus but High Clinical Suspicion. Radiology2020, 295 (1), 22–23. https://doi.org/ 10.1148/ radiol.2020200330.

10.    Estola, T. Coronaviruses, a New Group of Animal RNA Viruses. Avian Dis.1970, 14 (2), 330–336.

11.    Fabricant, J. The Early History of Infectious Bronchitis. Avian Dis.1998, 42 (4), 648–650.

12.    Decaro, N. Gammacoronavirus‡. The Springer Index of Viruses2011, 403–413. https://doi.org/10.1007/978-0-387-95919-1_58.

13.    Abruzzese, E.; Luciano, L.; D’Agostino, F.; Trawinska, M. M.; Pane, F.; Fabritiis, P. de. SARS-CoV-2 (COVID-19) and Chronic Myeloid Leukemia (CML): A Case Report and Review of ABL Kinase Involvement in Viral Infection: Mediterranean Journal of Hematology and Infectious Diseases2020, 12 (1), e2020031–e2020031. https://doi.org/10.4084/mjhid.2020.031.

14.    Hosts and Sources of Endemic Human Coronaviruses. Advances in Virus Research. Academic Press https:// www.sciencedirect.com/science/article/pii/S0065352718300010?via%3Dihub, pp 163–188. https://doi.org/10.1016/ bs.aivir.2018.01.001.

15.    Ruan, S. Likelihood of Survival of Coronavirus Disease 2019. The Lancet Infectious Diseases2020, 20 (6), 630–631. https://doi.org/ 10.1016/S1473-3099(20)30257-7.

16.    Clinical Virology, 4th Edition | Wiley https://www.wiley.com/en-us/Clinical+Virology%2C+4th+Edition-p-9781683673163 (accessed Jun 6, 2020).

17.    SARS: epidemiology. - Abstract - Europe PMC https:// europepmc.org/article/med/15018127 (accessed Jun 6, 2020).

18.    WHO | Middle East respiratory syndrome coronavirus (MERS-CoV) http://www.who.int/emergencies/mers-cov/en/ (accessed Jun 6, 2020).

19.    Bogoch, I. I.; Watts, A.; Thomas-Bachli, A.; Huber, C.; Kraemer, M. U. G.; Khan, K. Pneumonia of Unknown Aetiology in Wuhan, China: Potential for International Spread via Commercial Air Travel. J Travel Med2020, 27 (2). https://doi.org/10.1093/jtm/ taaa008.

20.    Lu, H.; Stratton, C. W.; Tang, Y.-W. Outbreak of Pneumonia of Unknown Etiology in Wuhan, China: The Mystery and the Miracle. J. Med. Virol.2020, 92 (4), 401–402. https://doi.org/ 10.1002/jmv.25678.

21.    Huang, C.; Wang, Y.; Li, X.; Ren, L.; Zhao, J.; Hu, Y.; Zhang, L.; Fan, G.; Xu, J.; Gu, X.; Cheng, Z.; Yu, T.; Xia, J.; Wei, Y.; Wu, W.; Xie, X.; Yin, W.; Li, H.; Liu, M.; Xiao, Y.; Gao, H.; Guo, L.; Xie, J.; Wang, G.; Jiang, R.; Gao, Z.; Jin, Q.; Wang, J.; Cao, B. Clinical Features of Patients Infected with 2019 Novel Coronavirus in Wuhan, China. The Lancet2020, 395 (10223), 497–506. https://doi.org/10.1016/S0140-6736(20)30183-5.

22.    Bw, N.; Bd, A.; C, Y.; Jd, Q.; G, O.; P, K.; Ra, M.; M, Y.; Mj, B. Supramolecular Architecture of Severe Acute Respiratory Syndrome Coronavirus Revealed by Electron Cryomicroscopy https://pubmed.ncbi.nlm.nih.gov/16873249/ (accessed May 30, 2020). https://doi.org/10.1128/JVI.00645-06.

23.    L, E.; F, A.; I, S.; S, Z. Biochemical Aspects of Coronavirus Replication and Virus-Host Interaction https:// pubmed.ncbi.nlm.nih.gov/16712436/ (accessed May 30, 2020). https://doi.org/10.1146/annurev.micro.60.080805.142157.

24.    Mm, L.; D, C. The Molecular Biology of Coronaviruses https://pubmed.ncbi.nlm.nih.gov/9233431/ (accessed May 30, 2020). https://doi.org/10.1016/S0065-3527(08)60286-9.

25.    [Springer Protocols Handbooks] Animal Coronaviruses __ https://ncov.pub/springer-protocols-handbooks-animal-coronaviruses.html (accessed May 30, 2020).

26.    Rn, K.; Ca, C.; N, W.; J, P.; Hm, Y.; Hl, T.; Ks, C.; Bs, G.; Js, M.; Ab, W. Pre-fusion Structure of a Human Coronavirus Spike Protein https://pubmed.ncbi.nlm.nih.gov/26935699/ (accessed May 30, 2020). https://doi.org/10.1038/nature17200.

27.    Ac, W.; Ma, T.; Bj, B.; B, F.; Pjm, R.; F, D.; Fa, R.; D, V. Cryo-electron Microscopy Structure of a Coronavirus Spike Glycoprotein Trimer https://pubmed.ncbi.nlm.nih.gov/26855426/ (accessed May 30, 2020). https://doi.org/10.1038/nature16988.

28.    Dr, B.; A, A.; E, G.; Tf, B. Architecture of the SARS Coronavirus Prefusion Spike https://pubmed.ncbi.nlm.nih.gov/16845391/ (accessed May 30, 2020). https://doi.org/10.1038/nsmb1123.

29.    F, L.; M, B.; W, L.; M, F.; Pr, D.; Sc, H. Conformational States of the Severe Acute Respiratory Syndrome Coronavirus Spike Protein Ectodomain https://pubmed.ncbi.nlm.nih.gov/16809285/ (accessed May 30, 2020). https://doi.org/10.1128/JVI.02744-05.

30.    Perlman, S.; Netland, J. Coronaviruses Post-SARS: Update on Replication and Pathogenesis. Nat. Rev. Microbiol.2009, 7 (6), 439–450. https://doi.org/10.1038/nrmicro2147.

31.    Pyrc, K.; Berkhout, B.; van der Hoek, L. The Novel Human Coronaviruses NL63 and HKU1. J. Virol.2007, 81 (7), 3051–3057. https://doi.org/10.1128/JVI.01466-06.

32.    Bovine-Like Coronaviruses Isolated from Four Species of Captive Wild Ruminants Are Homologous to Bovine Coronaviruses, Based on Complete Genomic Sequences | Journal of Virology https://jvi.asm.org/content/82/24/12422 (accessed Jun 1, 2020).

33.    Cavanagh, D. Severe Acute Respiratory Syndrome Vaccine Development: Experiences of Vaccination against Avian Infectious Bronchitis Coronavirus. Avian Pathol.2003, 32 (6), 567–582. https://doi.org/10.1080/03079450310001621198.

34.    Comparative analysis of complete genome sequences of three avian coronaviruses reveals a novel group 3c coronavirus. - Abstract - Europe PMC https://europepmc.org/article/pmc/ 2612373 (accessed Jun 1, 2020).

35.    Severe Acute Respiratory Syndrome Coronavirus nsp1 Facilitates Efficient Propagation in Cells through a Specific Translational Shutoff of Host mRNA https://www.ncbi.nlm.nih.gov/pmc/ articles/PMC3457165/ (accessed Jun 1, 2020).

36.    Fehr, A. R.; Perlman, S. Coronaviruses: An Overview of Their Replication and Pathogenesis. Coronaviruses2015, 1282, 1–23. https://doi.org/10.1007/978-1-4939-2438-7_1.

37.    Cui, J.; Li, F.; Shi, Z.-L. Origin and Evolution of Pathogenic Coronaviruses. Nature Reviews Microbiology2019, 17 (3), 181–192. https://doi.org/10.1038/s41579-018-0118-9.

38.    Zhu, N.; Zhang, D.; Wang, W.; Li, X.; Yang, B.; Song, J.; Zhao, X.; Huang, B.; Shi, W.; Lu, R.; Niu, P.; Zhan, F.; Ma, X.; Wang, D.; Xu, W.; Wu, G.; Gao, G. F.; Tan, W.; China Novel Coronavirus Investigating and Research Team. A Novel Coronavirus from Patients with Pneumonia in China, 2019. N. Engl. J. Med.2020, 382 (8), 727–733. https://doi.org/10.1056/ NEJMoa2001017.

39.    de Vries, A. A. F.; Horzinek, M. C.; Rottier, P. J. M.; de Groot, R. J. The Genome Organization of the Nidovirales: Similarities and Differences between Arteri-, Toro-, and Coronaviruses. Seminars in Virology1997, 8 (1), 33–47. https://doi.org/10.1006/ smvy.1997.0104.

40.    A pneumonia outbreak associated with a new coronavirus of probable bat origin | Nature https://www.nature.com/articles/ s41586-020-2012-7 (accessed Jun 1, 2020).

41.    Wu, F.; Zhao, S.; Yu, B.; Chen, Y.-M.; Wang, W.; Song, Z.-G.; Hu, Y.; Tao, Z.-W.; Tian, J.-H.; Pei, Y.-Y.; Yuan, M.-L.; Zhang, Y.-L.; Dai, F.-H.; Liu, Y.; Wang, Q.-M.; Zheng, J.-J.; Xu, L.; Holmes, E. C.; Zhang, Y.-Z. A New Coronavirus Associated with Human Respiratory Disease in China. Nature2020, 579 (7798), 265–269. https://doi.org/10.1038/s41586-020-2008-3.

42.    Zhou, P.; Yang, X.-L.; Wang, X.-G.; Hu, B.; Zhang, L.; Zhang, W.; Si, H.-R.; Zhu, Y.; Li, B.; Huang, C.-L.; Chen, H.-D.; Chen, J.; Luo, Y.; Guo, H.; Jiang, R.-D.; Liu, M.-Q.; Chen, Y.; Shen, X.-R.; Wang, X.; Zheng, X.-S.; Zhao, K.; Chen, Q.-J.; Deng, F.; Liu, L.-L.; Yan, B.; Zhan, F.-X.; Wang, Y.-Y.; Xiao, G.-F.; Shi, Z.-L. A Pneumonia Outbreak Associated with a New Coronavirus of Probable Bat Origin. Nature2020, 579 (7798), 270–273. https://doi.org/10.1038/s41586-020-2012-7.

43.    Du, L.; He, Y.; Zhou, Y.; Liu, S.; Zheng, B.-J.; Jiang, S. The Spike Protein of SARS-CoV--a Target for Vaccine and Therapeutic Development. Nat. Rev. Microbiol.2009, 7 (3), 226–236. https://doi.org/10.1038/nrmicro2090.

44.    Hoffmann, M.; Kleine-Weber, H.; Schroeder, S.; Krüger, N.; Herrler, T.; Erichsen, S.; Schiergens, T. S.; Herrler, G.; Wu, N.-H.; Nitsche, A.; Müller, M. A.; Drosten, C.; Pöhlmann, S. SARS-CoV-2 Cell Entry Depends on ACE2 and TMPRSS2 and Is Blocked by a Clinically Proven Protease Inhibitor. Cell2020, 181 (2), 271-280.e8. https://doi.org/10.1016/j.cell.2020.02.052.

45.    CDC. Coronavirus Disease 2019 (COVID-19) in the U.S. https://www.cdc.gov/coronavirus/2019-ncov/cases-updates/cases-in-us.html (accessed Jun 1, 2020).

46.    Guo, Y.-R.; Cao, Q.-D.; Hong, Z.-S.; Tan, Y.-Y.; Chen, S.-D.; Jin, H.-J.; Tan, K.-S.; Wang, D.-Y.; Yan, Y. The Origin, Transmission and Clinical Therapies on Coronavirus Disease 2019 (COVID-19) Outbreak - an Update on the Status. Mil Med Res2020, 7 (1), 11. https://doi.org/10.1186/s40779-020-00240-0.

47.    Sola, I.; Almazán, F.; Zúñiga, S.; Enjuanes, L. Continuous and Discontinuous RNA Synthesis in Coronaviruses. Annu Rev Virol2015, 2 (1), 265–288. https://doi.org/10.1146/annurev-virology-100114-055218.

48.    Zumla, A.; Hui, D. S.; Perlman, S. Middle East Respiratory Syndrome. Lancet2015, 386 (9997), 995–1007. https://doi.org/ 10.1016/S0140-6736(15)60454-8.

49.    Song, Z.; Xu, Y.; Bao, L.; Zhang, L.; Yu, P.; Qu, Y.; Zhu, H.; Zhao, W.; Han, Y.; Qin, C. From SARS to MERS, Thrusting Coronaviruses into the Spotlight. Viruses2019, 11 (1), 59. https:// doi.org/10.3390/v11010059.

50.    JCI Insight - Anti–spike IgG causes severe acute lung injury by skewing macrophage responses during acute SARS-CoV infection https://insight.jci.org/articles/view/123158 (accessed Jun 1, 2020).

51.    Blanco-Melo, D.; Nilsson-Payant, B. E.; Liu, W.-C.; Møller, R.; Panis, M.; Sachs, D.; Albrecht, R. A.; tenOever, B. R. SARS-CoV-2 Launches a Unique Transcriptional Signature from in Vitro, Ex Vivo, and in Vivo Systems. bioRxiv2020, 2020.03.24.004655. https://doi.org/10.1101/2020.03.24.004655.

52.    Corman, V. M.; Landt, O.; Kaiser, M.; Molenkamp, R.; Meijer, A.; Chu, D. K.; Bleicker, T.; Brünink, S.; Schneider, J.; Schmidt, M. L.; Mulders, D. G.; Haagmans, B. L.; van der Veer, B.; van den Brink, S.; Wijsman, L.; Goderski, G.; Romette, J.-L.; Ellis, J.; Zambon, M.; Peiris, M.; Goossens, H.; Reusken, C.; Koopmans, M. P.; Drosten, C. Detection of 2019 Novel Coronavirus (2019-NCoV) by Real-Time RT-PCR. Euro Surveill.2020, 25 (3). https://doi.org/10.2807/1560-7917.ES.2020.25.3.2000045.

53.    Fang, Y.; Zhang, H.; Xie, J.; Lin, M.; Ying, L.; Pang, P.; Ji, W. Sensitivity of Chest CT for COVID-19: Comparison to RT-PCR. Radiology2020, 200432. https://doi.org/10.1148/ radiol.2020200432.

54.    Perlman, S.; Netland, J. Coronaviruses Post-SARS: Update on Replication and Pathogenesis. Nat. Rev. Microbiol.2009, 7 (6), 439–450. https://doi.org/10.1038/nrmicro2147.

55.    Dimitrov, D. S. Virus Entry: Molecular Mechanisms and Biomedical Applications. Nat. Rev. Microbiol.2004, 2 (2), 109–122. https://doi.org/10.1038/nrmicro817.

56.    Ghosh, A. K.; Gemma, S. Structure-Based Design of Drugs and Other Bioactive Molecules: Tools and Strategies; John Wiley and Sons, 2014.

57.    Js, P.; St, L.; Ll, P.; Y, G.; Ly, Y.; W, L.; J, N.; Wk, Y.; Ww, Y.; Mt, C.; Vc, C.; Kh, C.; Dn, T.; Rw, Y.; Tk, N.; Ky, Y.; undefined. Coronavirus as a Possible Cause of Severe Acute Respiratory Syndrome. Lancet2003, 361 (9366), 1319–1325. https://doi.org/10.1016/s0140-6736(03)13077-2.

58.    Marra, M. A.; Jones, S. J. M.; Astell, C. R.; Holt, R. A.; Brooks-Wilson, A.; Butterfield, Y. S. N.; Khattra, J.; Asano, J. K.; Barber, S. A.; Chan, S. Y.; Cloutier, A.; Coughlin, S. M.; Freeman, D.; Girn, N.; Griffith, O. L.; Leach, S. R.; Mayo, M.; McDonald, H.; Montgomery, S. B.; Pandoh, P. K.; Petrescu, A. S.; Robertson, A. G.; Schein, J. E.; Siddiqui, A.; Smailus, D. E.; Stott, J. M.; Yang, G. S.; Plummer, F.; Andonov, A.; Artsob, H.; Bastien, N.; Bernard, K.; Booth, T. F.; Bowness, D.; Czub, M.; Drebot, M.; Fernando, L.; Flick, R.; Garbutt, M.; Gray, M.; Grolla, A.; Jones, S.; Feldmann, H.; Meyers, A.; Kabani, A.; Li, Y.; Normand, S.; Stroher, U.; Tipples, G. A.; Tyler, S.; Vogrig, R.; Ward, D.; Watson, B.; Brunham, R. C.; Krajden, M.; Petric, M.; Skowronski, D. M.; Upton, C.; Roper, R. L. The Genome Sequence of the SARS-Associated Coronavirus. Science2003, 300 (5624), 1399–1404. https://doi.org/10.1126/science.1085953.

59.    Li, W.; Greenough, T. C.; Moore, M. J.; Vasilieva, N.; Somasundaran, M.; Sullivan, J. L.; Farzan, M.; Choe, H. Efficient Replication of Severe Acute Respiratory Syndrome Coronavirus in Mouse Cells Is Limited by Murine Angiotensin-Converting Enzyme 2. J. Virol.2004, 78 (20), 11429–11433. https://doi.org/10.1128/JVI.78.20.11429-11433.2004.

60.    Li, F. Receptor Recognition Mechanisms of Coronaviruses: A Decade of Structural Studies. J Virol2014, 89 (4), 1954–1964. https://doi.org/10.1128/JVI.02615-14.

61.    Qu, X.-X.; Hao, P.; Song, X.-J.; Jiang, S.-M.; Liu, Y.-X.; Wang, P.-G.; Rao, X.; Song, H.-D.; Wang, S.-Y.; Zuo, Y.; Zheng, A.-H.; Luo, M.; Wang, H.-L.; Deng, F.; Wang, H.-Z.; Hu, Z.-H.; Ding, M.-X.; Zhao, G.-P.; Deng, H.-K. Identification of Two Critical Amino Acid Residues of the Severe Acute Respiratory Syndrome Coronavirus Spike Protein for Its Variation in Zoonotic Tropism Transition via a Double Substitution Strategy. J. Biol. Chem.2005, 280 (33), 29588–29595. https://doi.org/10.1074/jbc.M500662200.

62.    Li, F.; Li, W.; Farzan, M.; Harrison, S. C. Structure of SARS Coronavirus Spike Receptor-Binding Domain Complexed with Receptor. Science2005, 309 (5742), 1864–1868. https://doi.org/10.1126/science.1116480.

63.    Coronavirus Cases by Country | Nippon.com https://www.nippon.com/en/japan-data/h00673/coronavirus-cases-by-country.html (accessed Jun 1, 2020).

64.    Cascella, M.; Rajnik, M.; Cuomo, A.; Dulebohn, S. C.; Di Napoli, R. Features, Evaluation and Treatment Coronavirus (COVID-19). In StatPearls; StatPearls Publishing: Treasure Island (FL), 2020.

65.    Patel, A.; Jernigan, D. B.; 2019-nCoV CDC Response Team. Initial Public Health Response and Interim Clinical Guidance for the 2019 Novel Coronavirus Outbreak - United States, December 31, 2019-February 4, 2020. MMWR Morb. Mortal. Wkly. Rep.2020, 69 (5), 140–146. https://doi.org/10.15585/ mmwr.mm6905e1.

66.    Adhikari, S. P.; Meng, S.; Wu, Y.-J.; Mao, Y.-P.; Ye, R.-X.; Wang, Q.-Z.; Sun, C.; Sylvia, S.; Rozelle, S.; Raat, H.; Zhou, H. Epidemiology, Causes, Clinical Manifestation and Diagnosis, Prevention and Control of Coronavirus Disease (COVID-19) during the Early Outbreak Period: A Scoping Review. Infectious Diseases of Poverty2020, 9 (1), 29. https://doi.org/10.1186/ s40249-020-00646-x.

67.    Poudel Adhikari, S.; Meng, S.; Wu, Y.; Mao, Y.; Ye, R.; Wang, Q.; Sun, C.; Sylvia, S.; Rozelle, S.; Raat, H.; Zhou, H. A Literature Review of 2019 Novel Coronavirus During the Early Outbreak Period: Epidemiology, Causes, Clinical Manifestation and Diagnosis, Prevention and Control; preprint; MEDICINE and PHARMACOLOGY, 2020. https://doi.org/10.20944/ preprints202002.0060.v1.

68.    National Health Commission of the PRC http://en.nhc.gov.cn/ (accessed Jun 2, 2020).

69.    Chen, N.; Zhou, M.; Dong, X.; Qu, J.; Gong, F.; Han, Y.; Qiu, Y.; Wang, J.; Liu, Y.; Wei, Y.; Xia, J.; Yu, T.; Zhang, X.; Zhang, L. Epidemiological and Clinical Characteristics of 99 Cases of 2019 Novel Coronavirus Pneumonia in Wuhan, China: A Descriptive Study. The Lancet2020, 395 (10223), 507–513. https://doi.org/ 10.1016/S0140-6736(20)30211-7.

70.    Bai, Y.; Yao, L.; Wei, T.; Tian, F.; Jin, D.-Y.; Chen, L.; Wang, M. Presumed Asymptomatic Carrier Transmission of COVID-19. JAMA2020. https://doi.org/10.1001/jama.2020.2565.

71.    Wang, D.; Hu, B.; Hu, C.; Zhu, F.; Liu, X.; Zhang, J.; Wang, B.; Xiang, H.; Cheng, Z.; Xiong, Y.; Zhao, Y.; Li, Y.; Wang, X.; Peng, Z. Clinical Characteristics of 138 Hospitalized Patients With 2019 Novel Coronavirus–Infected Pneumonia in Wuhan, China. JAMA2020, 323 (11), 1061–1069. https://doi.org/10.1001/ jama.2020.1585.

72.    Huang, C.; Wang, Y.; Li, X.; Ren, L.; Zhao, J.; Hu, Y.; Zhang, L.; Fan, G.; Xu, J.; Gu, X.; Cheng, Z.; Yu, T.; Xia, J.; Wei, Y.; Wu, W.; Xie, X.; Yin, W.; Li, H.; Liu, M.; Xiao, Y.; Gao, H.; Guo, L.; Xie, J.; Wang, G.; Jiang, R.; Gao, Z.; Jin, Q.; Wang, J.; Cao, B. Clinical Features of Patients Infected with 2019 Novel Coronavirus in Wuhan, China. The Lancet2020, 395 (10223), 497–506. https://doi.org/10.1016/S0140-6736(20)30183-5.

73.    A familial cluster of pneumonia associated with the 2019 novel coronavirus indicating person-to-person transmission: a study of a family cluster - The Lancet https://www.thelancet.com/journals/ lancet/article/PIIS0140-6736(20)30154-9/fulltext (accessed Jun 2, 2020).

74.    Chung, M.; Bernheim, A.; Mei, X.; Zhang, N.; Huang, M.; Zeng, X.; Cui, J.; Xu, W.; Yang, Y.; Fayad, Z. A.; Jacobi, A.; Li, K.; Li, S.; Shan, H. CT Imaging Features of 2019 Novel Coronavirus (2019-NCoV). Radiology2020, 295 (1), 202–207. https://doi.org/ 10.1148/radiol.2020200230.

75.    Lu, H. Drug Treatment Options for the 2019-New Coronavirus (2019-NCoV). Biosci Trends2020, 14 (1), 69–71. https://doi.org/ 10.5582/bst.2020.01020.

76.    Zhou, D.; Dai, S.-M.; Tong, Q. COVID-19: A Recommendation to Examine the Effect of Hydroxychloroquine in Preventing Infection and Progression. J. Antimicrob. Chemother.2020. https://doi.org/ 10.1093/jac/dkaa114.

77.    Devaux, C. A.; Rolain, J.-M.; Colson, P.; Raoult, D. New Insights on the Antiviral Effects of Chloroquine against Coronavirus: What to Expect for COVID-19? Int. J. Antimicrob. Agents2020, 55 (5), 105938. https://doi.org/10.1016/j.ijantimicag.2020.105938.

78.    FURUTA, Y.; KOMENO, T.; NAKAMURA, T. Favipiravir (T-705), a Broad Spectrum Inhibitor of Viral RNA Polymerase. Proc Jpn Acad Ser B Phys Biol Sci2017, 93 (7), 449–463. https:// doi.org/10.2183/pjab.93.027.

79.    Jacobs, M.; Rodger, A.; Bell, D. J.; Bhagani, S.; Cropley, I.; Filipe, A.; Gifford, R. J.; Hopkins, S.; Hughes, J.; Jabeen, F.; Johannessen, I.; Karageorgopoulos, D.; Lackenby, A.; Lester, R.; Liu, R. S. N.; MacConnachie, A.; Mahungu, T.; Martin, D.; Marshall, N.; Mepham, S.; Orton, R.; Palmarini, M.; Patel, M.; Perry, C.; Peters, S. E.; Porter, D.; Ritchie, D.; Ritchie, N. D.; Seaton, R. A.; Sreenu, V. B.; Templeton, K.; Warren, S.; Wilkie, G. S.; Zambon, M.; Gopal, R.; Thomson, E. C. Late Ebola Virus Relapse Causing Meningoencephalitis: A Case Report. Lancet2016, 388 (10043), 498–503. https://doi.org/10.1016/ S0140-6736(16)30386-5.

80.    Holshue, M. L.; DeBolt, C.; Lindquist, S.; Lofy, K. H.; Wiesman, J.; Bruce, H.; Spitters, C.; Ericson, K.; Wilkerson, S.; Tural, A.; Diaz, G.; Cohn, A.; Fox, L.; Patel, A.; Gerber, S. I.; Kim, L.; Tong, S.; Lu, X.; Lindstrom, S.; Pallansch, M. A.; Weldon, W. C.; Biggs, H. M.; Uyeki, T. M.; Pillai, S. K.; Washington State 2019-nCoV Case Investigation Team. First Case of 2019 Novel Coronavirus in the United States. N. Engl. J. Med.2020, 382 (10), 929–936. https://doi.org/10.1056/NEJMoa2001191.

81.    First 12 patients with coronavirus disease 2019 (COVID-19) in the United States | medRxiv https://www.medrxiv.org/content/ 10.1101/2020.03.09.20032896v1 (accessed Jun 2, 2020).

82.    Habibzadeh, P.; Stoneman, E. K. The Novel Coronavirus: A Bird’s Eye View. Int J Occup Environ Med2020, 11 (2), 65–71. https://doi.org/10.15171/ijoem.2020.1921.

83.    Wang, Y.; Wang, Y.; Chen, Y.; Qin, Q. Unique Epidemiological and Clinical Features of the Emerging 2019 Novel Coronavirus Pneumonia (COVID-19) Implicate Special Control Measures. J. Med. Virol.2020. https://doi.org/10.1002/jmv.25748.

84.    Toots, M.; Yoon, J.-J.; Cox, R. M.; Hart, M.; Sticher, Z. M.; Makhsous, N.; Plesker, R.; Barrena, A. H.; Reddy, P. G.; Mitchell, D. G.; Shean, R. C.; Bluemling, G. R.; Kolykhalov, A. A.; Greninger, A. L.; Natchus, M. G.; Painter, G. R.; Plemper, R. K. Characterization of Orally Efficacious Influenza Drug with High Resistance Barrier in Ferrets and Human Airway Epithelia. Science Translational Medicine2019, 11 (515). https://doi.org/ 10.1126/scitranslmed.aax5866.

85.    Mehta, P.; McAuley, D. F.; Brown, M.; Sanchez, E.; Tattersall, R. S.; Manson, J. J. COVID-19: Consider Cytokine Storm Syndromes and Immunosuppression. The Lancet2020, 395 (10229), 1033–1034. https://doi.org/10.1016/S0140-6736(20)30628-0.

86.    Xu, X.; Han, M.; Li, T.; Sun, W.; Wang, D.; Fu, B.; Zhou, Y.; Zheng, X.; Yang, Y.; Li, X.; Zhang, X.; Pan, A.; Wei, H. Effective Treatment of Severe COVID-19 Patients with Tocilizumab. Proc. Natl. Acad. Sci. U.S.A.2020, 117 (20), 10970–10975. https://doi.org/10.1073/pnas.2005615117.

87.    Cheng, Y.; Wong, R.; Soo, Y. O. Y.; Wong, W. S.; Lee, C. K.; Ng, M. H. L.; Chan, P.; Wong, K. C.; Leung, C. B.; Cheng, G. Use of Convalescent Plasma Therapy in SARS Patients in Hong Kong. Eur. J. Clin. Microbiol. Infect. Dis.2005, 24 (1), 44–46. https://doi.org/10.1007/s10096-004-1271-9.

88.    Jiang, L.; Wang, N.; Zuo, T.; Shi, X.; Poon, K.-M. V.; Wu, Y.; Gao, F.; Li, D.; Wang, R.; Guo, J.; Fu, L.; Yuen, K.-Y.; Zheng, B.-J.; Wang, X.; Zhang, L. Potent Neutralization of MERS-CoV by Human Neutralizing Monoclonal Antibodies to the Viral Spike Glycoprotein. Sci Transl Med2014, 6 (234), 234ra59. https:// doi.org/10.1126/scitranslmed.3008140.

89.    Ying, T.; Du, L.; Ju, T. W.; Prabakaran, P.; Lau, C. C. Y.; Lu, L.; Liu, Q.; Wang, L.; Feng, Y.; Wang, Y.; Zheng, B.-J.; Yuen, K.-Y.; Jiang, S.; Dimitrov, D. S. Exceptionally Potent Neutralization of Middle East Respiratory Syndrome Coronavirus by Human Monoclonal Antibodies. J. Virol.2014, 88 (14), 7796–7805. https://doi.org/10.1128/JVI.00912-14.

90.    Tang, X.-C.; Agnihothram, S. S.; Jiao, Y.; Stanhope, J.; Graham, R. L.; Peterson, E. C.; Avnir, Y.; Tallarico, A. S. C.; Sheehan, J.; Zhu, Q.; Baric, R. S.; Marasco, W. A. Identification of Human Neutralizing Antibodies against MERS-CoV and Their Role in Virus Adaptive Evolution. Proc. Natl. Acad. Sci. U.S.A.2014, 111 (19), E2018-2026. https://doi.org/10.1073/pnas.1402074111.

91.    Channappanavar, R.; Lu, L.; Xia, S.; Du, L.; Meyerholz, D. K.; Perlman, S.; Jiang, S. Protective Effect of Intranasal Regimens Containing Peptidic Middle East Respiratory Syndrome Coronavirus Fusion Inhibitor Against MERS-CoV Infection. J. Infect. Dis.2015, 212 (12), 1894–1903. https://doi.org/10.1093/ infdis/jiv325.

92.    Soo, Y. O. Y.; Cheng, Y.; Wong, R.; Hui, D. S.; Lee, C. K.; Tsang, K. K. S.; Ng, M. H. L.; Chan, P.; Cheng, G.; Sung, J. J. Y. Retrospective Comparison of Convalescent Plasma with Continuing High-Dose Methylprednisolone Treatment in SARS Patients. Clin. Microbiol. Infect.2004, 10 (7), 676–678. https:// doi.org/10.1111/j.1469-0691.2004.00956.x.

93.    Pang, H.; Liu, Y.; Han, X.; Xu, Y.; Jiang, F.; Wu, D.; Kong, X.; Bartlam, M.; Rao, Z. Protective Humoral Responses to Severe Acute Respiratory Syndrome-Associated Coronavirus: Implications for the Design of an Effective Protein-Based Vaccine. J. Gen. Virol.2004, 85 (Pt 10), 3109–3113. https://doi.org/10.1099/ vir.0.80111-0.

94.    Barton, C.; Kouokam, J. C.; Lasnik, A. B.; Foreman, O.; Cambon, A.; Brock, G.; Montefiori, D. C.; Vojdani, F.; McCormick, A. A.; O’Keefe, B. R.; Palmer, K. E. Activity of and Effect of Subcutaneous Treatment with the Broad-Spectrum Antiviral Lectin Griffithsin in Two Laboratory Rodent Models. Antimicrob. Agents Chemother.2014, 58 (1), 120–127. https://doi.org/10.1128/ AAC.01407-13.

95.    Cell therapy in acute respiratory distress syndrome https:// www.ncbi.nlm.nih.gov/pmc/articles/PMC6196176/ (accessed Jun 2, 2020).

96.    Zumla, A.; Hui, D. S.; Azhar, E. I.; Memish, Z. A.; Maeurer, M. Reducing Mortality from 2019-NCoV: Host-Directed Therapies Should Be an Option. Lancet2020, 395 (10224), e35–e36. https://doi.org/10.1016/S0140-6736(20)30305-6.

97.    Prabakaran, P.; Gan, J.; Feng, Y.; Zhu, Z.; Choudhry, V.; Xiao, X.; Ji, X.; Dimitrov, D. S. Structure of Severe Acute Respiratory Syndrome Coronavirus Receptor-Binding Domain Complexed with Neutralizing Antibody. J. Biol. Chem.2006, 281 (23), 15829–15836. https://doi.org/10.1074/jbc.M600697200.

98.    Adedeji, A. O.; Severson, W.; Jonsson, C.; Singh, K.; Weiss, S. R.; Sarafianos, S. G. Novel Inhibitors of Severe Acute Respiratory Syndrome Coronavirus Entry That Act by Three Distinct Mechanisms. J. Virol.2013, 87 (14), 8017–8028. https://doi.org/ 10.1128/JVI.00998-13.

99.    Reeves, J. D.; Piefer, A. J. Emerging Drug Targets for Antiretroviral Therapy. Drugs2005, 65 (13), 1747–1766. https:// doi.org/10.2165/00003495-200565130-00002.

100.  Anand, K.; Ziebuhr, J.; Wadhwani, P.; Mesters, J. R.; Hilgenfeld, R. Coronavirus Main Proteinase (3CLpro) Structure: Basis for Design of Anti-SARS Drugs. Science2003, 300 (5626), 1763–1767. https://doi.org/10.1126/science.1085658.

101.  Sangwan, R. S.; Chaurasiya, N. D.; Misra, L. N.; Lal, P.; Uniyal, G. C.; Sharma, R.; Sangwan, N. S.; Suri, K. A.; Qazi, G. N.; Tuli, R. Phytochemical Variability in Commer- Cial Herbal Products and Preparations of Withania Somnifera (Ashwagandha). Current Science. 2004, 86 (3), 5.

102.  Fogolari, F.; Brigo, A.; Molinari, H. The Poisson-Boltzmann Equation for Biomolecular Electrostatics: A Tool for Structural Biology. J. Mol. Recognit.2002, 15 (6), 377–392. https://doi.org/ 10.1002/jmr.577.

103.  CDC. Coronavirus Disease 2019 (COVID-19) in the U.S. https://www.cdc.gov/coronavirus/2019-ncov/cases-updates/cases-in-us.html (accessed Jun 6, 2020).

104.  Li, J.; Li, J. (Justin); Xie, X.; Cai, X.; Huang, J.; Tian, X.; Zhu, H. Game Consumption and the 2019 Novel Coronavirus. The Lancet Infectious Diseases2020, 20 (3), 275–276. https://doi.org/10.1016/ S1473-3099(20)30063-3.

105.  Jin, Y.-H.; Cai, L.; Cheng, Z.-S.; Cheng, H.; Deng, T.; Fan, Y.-P.; Fang, C.; Huang, D.; Huang, L.-Q.; Huang, Q.; Han, Y.; Hu, B.; Hu, F.; Li, B.-H.; Li, Y.-R.; Liang, K.; Lin, L.-K.; Luo, L.-S.; Ma, J.; Ma, L.-L.; Peng, Z.-Y.; Pan, Y.-B.; Pan, Z.-Y.; Ren, X.-Q.; Sun, H.-M.; Wang, Y.; Wang, Y.-Y.; Weng, H.; Wei, C.-J.; Wu, D.-F.; Xia, J.; Xiong, Y.; Xu, H.-B.; Yao, X.-M.; Yuan, Y.-F.; Ye, T.-S.; Zhang, X.-C.; Zhang, Y.-W.; Zhang, Y.-G.; Zhang, H.-M.; Zhao, Y.; Zhao, M.-J.; Zi, H.; Zeng, X.-T.; Wang, Y.-Y.; Wang, X.-H.; , for the Zhongnan Hospital of Wuhan University Novel Coronavirus Management and Research Team, Evidence-Based Medicine Chapter of China International Exchange and Promotive Association for Medical and Health Care (CPAM). A Rapid Advice Guideline for the Diagnosis and Treatment of 2019 Novel Coronavirus (2019-NCoV) Infected Pneumonia (Standard Version). Mil Med Res2020, 7 (1), 4. https://doi.org/10.1186/ s40779-020-0233-6.

106.  Lei, J.; Li, J.; Li, X.; Qi, X. CT Imaging of the 2019 Novel Coronavirus (2019-NCoV) Pneumonia. Radiology2020, 295 (1), 18–18. https://doi.org/10.1148/radiol.2020200236.

107.  Assiri, A.; Al-Tawfiq, J. A.; Al-Rabeeah, A. A.; Al-Rabiah, F. A.; Al-Hajjar, S.; Al-Barrak, A.; Flemban, H.; Al-Nassir, W. N.; Balkhy, H. H.; Al-Hakeem, R. F.; Makhdoom, H. Q.; Zumla, A. I.; Memish, Z. A. Epidemiological, Demographic, and Clinical Characteristics of 47 Cases of Middle East Respiratory Syndrome Coronavirus Disease from Saudi Arabia: A Descriptive Study. Lancet Infect Dis2013, 13 (9), 752–761. https://doi.org/10.1016/ S1473-3099(13)70204-4.

108.  Wu, H.; Huang, J.; Zhang, C. J. P.; He, Z.; Ming, W.-K. Facemask Shortage and the Novel Coronavirus Disease (COVID-19) Outbreak: Reflections on Public Health Measures. EClinicalMedicine2020, 21. https://doi.org/10.1016/ j.eclinm.2020.100329.

109.  El Bcheraoui, C.; Mimche, H.; Miangotar, Y.; Krish, V. S.; Ziegeweid, F.; Krohn, K. J.; Ekat, M. H.; Nansseu, J. R.; Dimbuene, Z. T.; Olsen, H. E.; Tine, R. C. K.; Odell, C. M.; Troeger, C. E.; Kassebaum, N. J.; Farag, T.; Hay, S. I.; Mokdad, A. H. Burden of Disease in Francophone Africa, 1990-2017: A Systematic Analysis for the Global Burden of Disease Study 2017. Lancet Glob Health2020, 8 (3), e341–e351. https://doi.org/ 10.1016/S2214-109X(20)30024-3.

 

 

 

Received on 21.06.2020            Modified on 16.07.2020

Accepted on 21.09.2020      ©Asian Pharma Press All Right Reserved

Asian J. Res. Pharm. Sci. 2020; 10(4):299-310.

DOI: 10.5958/2231-5659.2020.00052.1